Information for 24-AATAGGAGGACCC (Motif 28)

C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A A C G T A C G T
p-value:1e-6
log p-value:-1.456e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 23.8bp
Average Position of motif in Background34.0 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AATAGGAGGACCC
---GGGAGGACNG
 C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AATAGGAGGACCC---
------AAGACCCYYN
 C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AATAGGAGGACCC
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AATAGGAGGACCC
CCAAAAATAG--------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AATAGGAGGACCC----
-NNNGGGGCGCCCCCNN
 C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AATAGGAGGACCC-
CTACTAGGATGTNNTN
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AATAGGAGGACCC---
----GGACCACCCACG
 C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0094.1_Zfp128_1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AATAGGAGGACCC---
TCTTTGGCGTACCCTAA
 A C G T C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AATAGGAGGACCC
CATACAATACGAAATAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AATAGGAGGACCC
AACAGGAAGT---
 C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A G T C A G T C A G T C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T