Information for 11-GAAAATTCGCAGACCT (Motif 13)

C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T
Reverse Opposite:
C G T A A C T G C T A G A C G T A T G C C G A T A C T G A G T C C T A G C T G A C T G A A C G T A C G T A G C T C G A T A G T C
p-value:1e-12
log p-value:-2.797e+01
Information Content per bp:1.745
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.7 +/- 14.0bp
Average Position of motif in Background45.5 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0041.1_Mafb_1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAAAATTCGCAGACCT---
--AAATTTGCTGACTTAGA
 C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GAAAATTCGCAGACCT--
--------CCAGACRSVB
 C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAAAATTCGCAGACCT----
---CAAATCCAGACATCACA
 C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GAAAATTCGCAGACCT
--------CCAGACAG
 C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAAAATTCGCAGACCT
TGACANARRCCAGRC--
 A C G T C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAAAATTCGCAGACCT--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAAATTCGCAGACCT
-TAAAAATGCTGACTT
 C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T
A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAAAATTCGCAGACCT-
--AAAWWTGCTGACWWD
 C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T A C G T
A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAAAATTCGCAGACCT
AGAGRRACAGCWGAC--
 A C G T C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAAAATTCGCAGACCT
---AATTTGCTGAC--
 C T A G G C T A C T G A G T C A G T C A A G C T A G C T A G T C T A C G G T A C C G T A A T C G C G T A A G T C G T A C A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T