Information for 15-GKTTGCTBCTGCT (Motif 25)

C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T
Reverse Opposite:
C G T A A C T G A T G C C G T A A T C G T A G C C T G A A T C G G T A C C T G A C T G A G T C A A G T C
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.733
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif149.6
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets52.4 +/- 20.2bp
Average Position of motif in Background48.8 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GKTTGCTBCTGCT---
----CCCCCTGCTGTG
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GKTTGCTBCTGCT----
CTCAGCAGCTGCTACTG
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GKTTGCTBCTGCT-----
---AGATGCTRCTRCCHT
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GKTTGCTBCTGCT
---AGCAGCTGCT
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GKTTGCTBCTGCT
---CGCAGCTGCG
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GKTTGCTBCTGCT
-----CAGCTGNT
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GKTTGCTBCTGCT-
----NCAGCTGCTG
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GKTTGCTBCTGCT---
---TGCAGCTGTCCCT
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GKTTGCTBCTGCT--
---AGCAGCTGCTNN
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GKTTGCTBCTGCT
--NNGCAGCTGTC
 C T A G C A G T A G C T A G C T A C T G T A G C G A C T A C T G A T G C A C G T A T C G A G T C C G A T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C