Information for 8-GCAAATCATG (Motif 23)

A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G
Reverse Opposite:
A T G C G T C A C G A T C T A G C G T A A G C T A C G T A C G T T C A G G T A C
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.857
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif82.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets61.2 +/- 22.9bp
Average Position of motif in Background48.9 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCAAATCATG---
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCAAATCATG-
-CAAATCACTG
 A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G A C G T
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCAAATCATG---
NNCTNAATTATGANN
 A C G T A C G T A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATCATG
ATATGCAAATNNN-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCAAATCATG
-CCAATCAA-
 A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCAAATCATG
ATATGCAAAT----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCAAATCATG
GGCCATAAATCAC-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATCATG
TTATGCAAAT----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCAAATCATG
----GTCATN
 A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCAAATCATG
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C T G A A C G T A G T C C G T A A C G T A T C G
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A