Information for 12-TCTGATTTTTTTC (Motif 20)

A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C
Reverse Opposite:
A T C G C T G A C G T A C G T A C T G A C G T A C G T A C G T A A G C T A T G C C G T A A C T G C G T A
p-value:1e-10
log p-value:-2.348e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.7 +/- 23.8bp
Average Position of motif in Background62.1 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCTGATTTTTTTC-----
----TTTTTTTTCNNGTN
 A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCTGATTTTTTTC-
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTGATTTTTTTC---
NNNNTTTTTTTTTNAAC
 A C G T A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTGATTTTTTTC
CNGTGATTTN----
 A C G T A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCTGATTTTTTTC-
--TGATTTATGGCC
 A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTGATTTTTTTC
CCTTTGATCTTT---
 A C G T A C G T A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTGATTTTTTTC-
-NTGATTTATGGCC
 A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C A C G T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTGATTTTTTTC
--TGATTTATGGC
 A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCTGATTTTTTTC
TGCTGTGATTT-----
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCTGATTTTTTTC-
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G C T G A A C G T A C G T A C G T A G C T A C G T A C G T A G C T A T G C A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T