Information for 10-AATSMSAAGCAYATWK (Motif 13)

C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T
Reverse Opposite:
G T C A C G T A C G T A A C G T C T A G A C G T A C T G T A G C A C G T A C G T A T G C A C G T A T G C C G T A A C G T A G C T
p-value:1e-11
log p-value:-2.761e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 26.4bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATSMSAAGCAYATWK
YTAATTRAWWCCAGATGT
 A C G T A C G T C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:AATSMSAAGCAYATWK-
------AAGGATATNTN
 C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AATSMSAAGCAYATWK----
----CGAAGCACACAAAATA
 C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AATSMSAAGCAYATWK
------AAGCACATGG
 C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

BHLHE23/MA0817.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AATSMSAAGCAYATWK--
------AAACATATGTTT
 C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:AATSMSAAGCAYATWK-
-------ANCATATGGT
 C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AATSMSAAGCAYATWK
----ATATGCAAAT--
 C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T
A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AATSMSAAGCAYATWK-
-------ANCATATGGT
 C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AATSMSAAGCAYATWK-
----ATATGCAAATNNN
 C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

OLIG1/MA0826.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AATSMSAAGCAYATWK-
-------AACATATGTT
 C T G A C G T A C G A T A T C G G T C A A T C G G T C A C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T