Information for 3-AAAAACTACAATTCCC (Motif 5)

C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A C T G A C G A T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A G C T C A G T A C G T
p-value:1e-13
log p-value:-3.093e+01
Information Content per bp:1.882
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.5 +/- 20.3bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:4
Orientation:forward strand
Alignment:AAAAACTACAATTCCC
----ACTACAATTCCC
 C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.79
Offset:3
Orientation:forward strand
Alignment:AAAAACTACAATTCCC-------
---RACTACAACTCCCAGVAKGC
 C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AAAAACTACAATTCCC-------
---AACTACAATTCCCAGAATGC
 C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAAAACTACAATTCCC
--AAACCACANN----
 C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAAAACTACAATTCCC
-NWAACCACADNN---
 C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAAAACTACAATTCCC
-NAAACCACAG-----
 C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAAAACTACAATTCCC
--AAACCACAGC----
 C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAAAACTACAATTCCC
CAAACAACAACACCT---
 A C G T A C G T C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AAAAACTACAATTCCC
GCAAAACATTACTA-----
 A C G T A C G T A C G T C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AAAAACTACAATTCCC
ATTTACGACAAATAGC
 C G T A G T C A C T G A G T C A C G T A A G T C A C G T C G T A A G T C C T G A C G T A A G C T A C G T A G T C A G T C A G T C
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C