Information for 7-GGCCGGHGTGAGACAA (Motif 17)

A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A
Reverse Opposite:
C G A T A C G T A T C G C G A T A G T C A C G T A G T C T C G A A G T C C G T A G T A C G A T C A C T G A T C G A G T C A T G C
p-value:1e-9
log p-value:-2.113e+01
Information Content per bp:1.702
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif16.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets65.1 +/- 18.1bp
Average Position of motif in Background46.2 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGCCGGHGTGAGACAA
---AGGTGNCAGACAG
 A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGCCGGHGTGAGACAA
---AGGTGHCAGACA-
 A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A
A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GGCCGGHGTGAGACAA
--------TGAGTCA-
 A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGCCGGHGTGAGACAA
NNTNNGGGGCGGNGNGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GGCCGGHGTGAGACAA--
-------NTGAGTCATCN
 A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGCCGGHGTGAGACAA-
-----NNVTGASTCATN
 A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGCCGGHGTGAGACAA-
-----NNATGAGTCATN
 A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGCCGGHGTGAGACAA-
-------ATGASTCATY
 A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGCCGGHGTGAGACAA
-----GGATGACTCAT
 A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GGCCGGHGTGAGACAA
------GATGAGTCAT
 A T C G A C T G A T G C G T A C C A T G A C T G G A C T T A C G A C G T A C T G T G C A T C A G G C T A A T G C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T