Information for 6-GCGGAGCGDCGCCCGC (Motif 13)

A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C
Reverse Opposite:
A C T G A G T C A T C G A C T G A C T G A G T C A C T G G A C T A G T C A C T G A T G C A C G T G T A C A G T C A T C G G T A C
p-value:1e-10
log p-value:-2.341e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.6 +/- 22.9bp
Average Position of motif in Background33.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCGGAGCGDCGCCCGC-
-----GCCACRCCCACY
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

SP4/MA0685.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCGGAGCGDCGCCCGC---
--TAAGCCACGCCCCCTTT
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCGGAGCGDCGCCCGC-
-----GCTCCGCCCMCY
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCGGAGCGDCGCCCGC-
-----GCCMCGCCCMCY
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

SP8/MA0747.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCGGAGCGDCGCCCGC-
-----GCCACGCCCACT
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCGDCGCCCGC
-GGGGGCGGGGCC---
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCGGAGCGDCGCCCGC--
----GGCCACGCCCCCTT
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCGGAGCGDCGCCCGC
-----GCCACGCCCCC
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C
A C G T A C G T A C G T A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

KLF16/MA0741.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCGGAGCGDCGCCCGC
-----GCCACGCCCCC
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C
A C G T A C G T A C G T A C G T A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCGDCGCCCGC
-CGGAGC---------
 A C T G A T G C C T A G A C T G T G C A A T C G A G T C A C T G C T G A A G T C A C T G A G T C A G T C A T G C C T A G A G T C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T