Information for 17-CTTGGCVCCAAGA (Motif 27)

A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A
Reverse Opposite:
A C G T A T G C A C G T A C G T C T A G A C T G A G T C A T C G A G T C A G T C C G T A C G T A A T C G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets36.4 +/- 21.2bp
Average Position of motif in Background45.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTTGGCVCCAAGA--
AGCTCGGCGCCAAAAGC
 A C G T A C G T A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGCVCCAAGA-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTGGCVCCAAGA
TTTGGCGCCAAA-
 A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGCVCCAAGA
NNTTGGCANN----
 A C G T A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTGGCVCCAAGA
NTTGGCANN----
 A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTTGGCVCCAAGA
-TTGGCA------
 A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTTGGCVCCAAGA
-TTCGCGCGAAAA
 A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A
A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTTGGCVCCAAGA
--TGGGGCCCAC-
 A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A
A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CTTGGCVCCAAGA
TGACCTTTGCCCCA---
 A C G T A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CTTGGCVCCAAGA
TGGACTTTGNNCTNTG-
 A C G T A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C T G A T G C T A C G A G T C A G T C G T C A C G T A A T C G G T C A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T