Information for 14-GCTGCTTAGC (Motif 26)

C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C
Reverse Opposite:
A C T G A G T C C A G T C G T A C G T A A C T G A G T C C T G A A T C G A G T C
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.826
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif35.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.7 +/- 24.3bp
Average Position of motif in Background55.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTTAGC--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTTAGC--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------GCTGCTTAGC------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTTAGC----
KGTTGCTAGGMAACA
 A C G T C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C A C G T A C G T A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCTTAGC
CTGTTGCTAGGS
 A C G T A C G T C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTGCTTAGC
--NGCTN---
 C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:7
Score:0.56
Offset:-12
Orientation:forward strand
Alignment:------------GCTGCTTAGC
ACTYKNATTCGTGNTACTTC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCTGCTTAGC
AATTTGCTGAC-
 A C G T A C G T C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T

PH0032.1_Evx2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTTAGC----
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCTGCTTAGC
AAGAGGATTAG-
 A C G T A C G T C T A G T A G C A G C T A C T G A G T C A C G T C G A T G T C A A C T G A G T C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T