Information for 6-CGCCCTCTTG (Motif 12)

A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G
Reverse Opposite:
T G A C C G T A G T C A A C T G C T G A A C T G A T C G A C T G A G T C T C A G
p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.711
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.59%
Number of Background Sequences with motif1125.0
Percentage of Background Sequences with motif2.38%
Average Position of motif in Targets54.5 +/- 27.4bp
Average Position of motif in Background50.2 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCTTG--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCTCTTG
GCCGCCATCTTG
 A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------CGCCCTCTTG----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGCCCTCTTG------
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCTCTTG
GCNGCCATCTTG
 A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

KLF14/MA0740.1/Jaspar

Match Rank:6
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCTTG
GGCCACGCCCCCTT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGCCCTCTTG------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCTCTTG
GCCMCGCCCMCY--
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGCCCTCTTG--
TCCGCCCCCGCATT
 A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCTCTTG
GCTCCGCCCMCY--
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T G C G T A C G A C T A G T C A C G T G C A T A C T G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T