Information for 2-TDTGTTGCCCTAV (Motif 3)

A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A
Reverse Opposite:
A C G T A C G T C G T A A T C G C T A G A C T G A G T C C G T A C G T A A G T C C G T A G A T C C G T A
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif21.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.7 +/- 25.2bp
Average Position of motif in Background54.2 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXC2/MA0846.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TDTGTTGCCCTAV
TTTGTTTACTTA-
 A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TDTGTTGCCCTAV
-ATATTTACATA-
 A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TDTGTTGCCCTAV-
CTTTGTTTACTTTTN
 A C G T A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TDTGTTGCCCTAV
NNNNTTTGTTTACNNT-
 A C G T A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TDTGTTGCCCTAV
--TRTTTACTTW-
 A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TDTGTTGCCCTAV-
BSNTGTTTACWYWGN
 A C G T A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TDTGTTGCCCTAV
TNNTCCTTTGTTCTNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TDTGTTGCCCTAV-
--TGTTTACTTAGG
 A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TDTGTTGCCCTAV-
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TDTGTTGCCCTAV-
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C G T A C G T A C T G G T A C A G T C A T G C A C G T G T C A T C G A A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T