Information for 6-RKMAVTTWDCTGGCTG (Motif 8)

C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G
Reverse Opposite:
G T A C C G T A A C T G A T G C G T A C G C T A C A T G G A C T G C T A G C T A C G T A A G T C C G A T C A G T T G C A G A C T
p-value:1e-11
log p-value:-2.711e+01
Information Content per bp:1.554
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif9.25%
Number of Background Sequences with motif1376.9
Percentage of Background Sequences with motif2.83%
Average Position of motif in Targets48.3 +/- 21.2bp
Average Position of motif in Background50.5 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.64
Offset:11
Orientation:reverse strand
Alignment:RKMAVTTWDCTGGCTG
-----------NGCTN
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RKMAVTTWDCTGGCTG-
-NGANTTTTATGGCTCN
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G A C G T
A C G T G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:9
Orientation:forward strand
Alignment:RKMAVTTWDCTGGCTG-
---------TWGTCTGV
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RKMAVTTWDCTGGCTG-
ANTAATTTTATGGCCGN
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:forward strand
Alignment:RKMAVTTWDCTGGCTG--
-------AATTTGCTGAC
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:RKMAVTTWDCTGGCTG-----
------AAAWWTGCTGACWWD
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:RKMAVTTWDCTGGCTG----
-----TAAAAATGCTGACTT
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:12
Orientation:forward strand
Alignment:RKMAVTTWDCTGGCTG--
------------GCTGTG
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:RKMAVTTWDCTGGCTG------
-------AAANTGCTGACTNAG
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RKMAVTTWDCTGGCTG-------
-----NAAAANTGCTGACTCAGC
 C T G A A C G T G T C A C G T A T C A G G C A T C G A T C G A T C T G A G T A C C G A T A C T G T A C G G T A C C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C