Information for 3-AGGWKWTGGATADGTA (Motif 3)

C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A
Reverse Opposite:
G A C T C G T A G A T C G A C T A G C T G T C A G A C T A G T C G A T C C G T A C G T A G T C A G C A T A G T C G T A C G A C T
p-value:1e-14
log p-value:-3.365e+01
Information Content per bp:1.647
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif138.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets40.4 +/- 25.5bp
Average Position of motif in Background55.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGWKWTGGATADGTA
ACAGGATGTGGT------
 A C G T A C G T C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGGWKWTGGATADGTA--
-CTACTTGGATACGGAAT
 C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A A C G T A C G T
A C G T A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGGWKWTGGATADGTA---
--GTATTGGGTGGGTAATT
 C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A A C G T A C G T A C G T
A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AGGWKWTGGATADGTA
----NATGGAAAAN--
 C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGGWKWTGGATADGTA
TATTATGGGATGGATAA---
 A C G T A C G T A C G T A C G T C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGGWKWTGGATADGTA
AGGTCAAGGTCA----
 C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AGGWKWTGGATADGTA
-----AAGGATATNTN
 C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Gata1/MA0035.3/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:AGGWKWTGGATADGTA
-----ANAGATAAGAA
 C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A
A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGGWKWTGGATADGTA------
TTTTTAGAGATAAGAAATAAAG
 C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:AGGWKWTGGATADGTA
------TGGAAAA---
 C T G A C A T G A C T G C G T A C A G T G C A T C G A T C T A G A C T G C T G A A C G T C T G A C T G A C T A G C G A T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T