Information for 4-AGTTATTTGG (Motif 19)

C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G
Reverse Opposite:
A T G C A G T C C G T A C G T A C G T A A C G T T G C A C T G A A G T C C G A T
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.846
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif141.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets42.5 +/- 31.9bp
Average Position of motif in Background51.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGTTATTTGG
CNGTGATTTN-
 A C G T C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTTATTTGG
AATTATT---
 C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGTTATTTGG-
-NTTAATTGNN
 C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G A C G T
A C G T C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTTATTTGG
--NTAATTGG
 C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G
A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

HESX1/MA0894.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGTTATTTGG-
-GCTAATTGGC
 C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G A C G T
A C G T T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C

PH0108.1_Msx3/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGTTATTTGG-----
NNNTTAATTGGTTTTN
 A C G T C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGTTATTTGG-----
NNNTTAATTGGTTTTT
 A C G T C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTTATTTGG
--NTAATTGN
 C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G
A C G T A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTATTTGG
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

GBX1/MA0889.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTTATTTGG-
-GCTAATTAGN
 C G T A C T A G A G C T A C G T G T C A A C G T A C G T A C G T C T A G T A C G A C G T
A C G T T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T