Information for 10-CGAGGTGAGG (Motif 23)

A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C C G T A A G T C A G T C A C G T A G T C A C T G
p-value:1e-5
log p-value:-1.179e+01
Information Content per bp:1.961
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 17.6bp
Average Position of motif in Background52.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGAGGTGAGG
-CAGGTGAGG
 A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGAGGTGAGG--
-CAGGTAAGTAT
 A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGAGGTGAGG----
GCGGAGGTGTCGCCTC
 A C G T A C G T A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGAGGTGAGG
TRAGGTCA--
 A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGAGGTGAGG
AGRGGTCA--
 A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGAGGTGAGG
TCAAGGTCAN-
 A C G T A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGAGGTGAGG
NNCAGGTGNN-
 A C G T A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGAGGTGAGG
ATCAAGGTCA--
 A C G T A C G T A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGAGGTGAGG
--AGGTGTGA
 A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGAGGTGAGG
GTGGGGTGAT-
 A C G T A G T C A C T G C G T A A C T G A C T G A C G T A C T G C G T A C T A G A C T G
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T