Information for 12-GCCACCTGCTTCCCAG (Motif 22)

A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
Reverse Opposite:
G T A C A C G T A C T G A C T G A C T G C G T A C T G A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A C T G G T A C
p-value:1e-6
log p-value:-1.386e+01
Information Content per bp:1.923
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 19.5bp
Average Position of motif in Background39.1 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTGCTTCCCAG
SNGCACCTGCHS-----
 A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCTTCCCAG
NNCACCTGNN------
 A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCACCTGCTTCCCAG
-NCACCTGTN------
 A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCCACCTGCTTCCCAG
--CAGCTGTTTCCT--
 A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCTTCCCAG
GCCATCTGTT------
 A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCTTCCCAG
AACACCTGCT------
 A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCTGCTTCCCAG
CNGACACCTGTTCNNN--
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCTTCCCAG
ACCACCTGTT------
 A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCTTCCCAG
TACACCTGTC------
 A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCACCTGCTTCCCAG
ACCACGTGCTC-----
 A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T A C G T A G T C G T A C A G T C G T C A A C T G
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T A C G T A C G T A C G T