Information for 1-AGGGTTTCTCCCC (Motif 2)

C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G T C A G A T C G C G T A T A C G C G T A G C T A T G C A A G T C G T A C G A T C A C G T
p-value:1e-21
log p-value:-4.850e+01
Information Content per bp:1.792
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif5.44%
Number of Background Sequences with motif57.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets46.0 +/- 23.0bp
Average Position of motif in Background46.6 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:AGGGTTTCTCCCC-
--------TCCCCA
 C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGGTTTCTCCCC
-GGGGATTTCC--
 C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGGTTTCTCCCC
NGGGGATTTCCC-
 C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGGTTTCTCCCC
-GGGGATTCCCCC
 C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGGTTTCTCCCC
AGGGGATTCCCCT
 C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTTTCTCCCC
AAGGATATNTN---
 A C G T C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGGGTTTCTCCCC-----
-NNTTTTCACACCTTNNN
 C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGGGTTTCTCCCC-
--VDTTTCCCGCCA
 C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C A C G T
A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGGGTTTCTCCCC
-GGGAATTTCC--
 C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGGGTTTCTCCCC------
--AAATTCCCCCCGGAAGT
 C G T A C T A G A C T G T C A G A C G T C A G T A C G T A G T C A C G T A T G C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T