Information for 4-CGGCCTTGTT (Motif 13)

G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T
Reverse Opposite:
C G T A C G T A G T A C C T G A G C T A A T C G A C T G G T A C A G T C A C T G
p-value:1e-7
log p-value:-1.761e+01
Information Content per bp:1.758
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif6.99%
Number of Background Sequences with motif689.2
Percentage of Background Sequences with motif1.43%
Average Position of motif in Targets51.3 +/- 23.1bp
Average Position of motif in Background50.7 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGCCTTGTT
AGGCCTAG--
 G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCTTGTT-
GCNGCCATCTTG
 A C G T G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGCCTTGTT
AGGCCTNG--
 G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCTTGTT-
GCCGCCATCTTG
 A C G T G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGGCCTTGTT
BNTGDCCTTG--
 A C G T A C G T G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGGCCTTGTT-----
---SCHTGTTTACAT
 G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGGCCTTGTT-------
--GTNTTGTTGTGANNT
 G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CGGCCTTGTT---
-----TTGTTTAC
 G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

PB0131.1_Gmeb1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGGCCTTGTT--
TGGGCGACGTCGTTAA
 A C G T A C G T A C G T A C G T G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T A C G T A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGGCCTTGTT-----
GAGCCCTTGTCCCTAA
 A C G T G T A C A C T G A C T G G T A C A T G C C G A T A G C T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G