Information for 1-GAATGTGGGAAAACCT (Motif 1)

T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
Reverse Opposite:
G C T A C A T G A C T G A C G T G C A T A G C T G A C T A G T C G A T C G A T C G C T A G A T C G T C A A G C T A C G T A T G C
p-value:1e-25
log p-value:-5.953e+01
Information Content per bp:1.425
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.4 +/- 25.7bp
Average Position of motif in Background45.2 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GAATGTGGGAAAACCT
---CSTGGGAAAD---
 T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAATGTGGGAAAACCT
GAAAAGGTGTGAAAATT-
 A C G T A C G T T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAATGTGGGAAAACCT
-AAGGTGTGAAAAT--
 T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAATGTGGGAAAACCT
--AGGTGTGAAA----
 T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAATGTGGGAAAACCT
-AAGGTGTKAA-----
 T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GAATGTGGGAAAACCT
------TGGAAAA---
 T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAATGTGGGAAAACCT
-AAGGTGTGAA-----
 T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAATGTGGGAAAACCT
---NATGGAAAAN---
 T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAATGTGGGAAAACCT
-AAGGTGTGAAA----
 T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAATGTGGGAAAACCT
--AGGTGTGAAM----
 T A C G T G C A T C G A C A G T C A T G C G A T C T A G C T A G T C A G C T G A T C G A C G T A T G C A T G A C G T A C C G A T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T