Information for 4-CGGAAAGCGA (Motif 13)

G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A
Reverse Opposite:
A G C T A G T C A T C G A G T C A C G T A G C T A G C T A T G C A G T C C A T G
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.838
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif131.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets59.2 +/- 27.7bp
Average Position of motif in Background51.7 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2/MA0051.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGGAAAGCGA---------
-GGAAAGCGAAACCAAAAC
 G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAAGCGA
NNTGGAAANN--
 A C G T A C G T G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAAGCGA
AATGGAAAAT--
 A C G T A C G T G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGAAAGCGA----
ACGAAAGCGAAAGT
 G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A A C G T A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGGAAAGCGA----
--GRAASTGAAAST
 G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGGAAAGCGA----
--GAAASYGAAASY
 G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAAGCGA
DCCGGAARYN--
 A C G T A C G T G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAAGCGA
RCCGGAARYN--
 A C G T A C G T G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGGAAAGCGA----
--GAAACTGAAACT
 G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGAAAGCGA------
-GGAAANTGAAACTNA
 G A T C A C T G A T C G T C G A C T G A C G T A C T A G A T G C T C A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A