Information for 10-CSGATTTTGCARN (Motif 12)

A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
Reverse Opposite:
T C A G G A C T A C G T A T C G A T G C T G C A C G T A T C G A G T C A C G A T A T G C A T G C T A C G
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.682
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif80.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets43.3 +/- 25.9bp
Average Position of motif in Background49.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CSGATTTTGCARN
---NNTTGGCANN
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CSGATTTTGCARN--
ANATTTTTGCAANTN
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CSGATTTTGCARN
--NATTGTGCAAT
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CSGATTTTGCARN
--NATGTTGCAA-
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CSGATTTTGCARN
----CTTGGCAA-
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CSGATTTTGCARN
----NTTGGCANN
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CSGATTTTGCARN
-----TTGGCA--
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CSGATTTTGCARN
---ATTTTCCATT
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CSGATTTTGCARN
---ATTGCGCAAC
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CSGATTTTGCARN
---ATTTTCCATT
 A T G C T A C G A T C G G C T A A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T G A A G C T
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T