Information for 4-AGTGTCTCCTTTCACY (Motif 4)

T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C
Reverse Opposite:
C T A G A C T G C G A T T A C G C T G A T C G A C T G A C T A G C A T G C T G A A C T G C T G A A T G C G C T A G T A C A G C T
p-value:1e-13
log p-value:-3.092e+01
Information Content per bp:1.624
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif110.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets49.2 +/- 25.4bp
Average Position of motif in Background52.8 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGTGTCTCCTTTCACY---
----TGACCTTTGCCCTAN
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGTGTCTCCTTTCACY--
----TGACCTTTGCCCTA
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGTGTCTCCTTTCACY--
----TGACCTTTGCCCCA
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGTGTCTCCTTTCACY--
----TGACCTTTGACCTC
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGTGTCTCCTTTCACY---
----TGACCTCTGACCCCN
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGTGTCTCCTTTCACY--
----TGACCTTTGACCTN
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGTGTCTCCTTTCACY
---GKMTCADRTTWC-
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C
A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGTGTCTCCTTTCACY--
----TGACCTTTGACCCC
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGTGTCTCCTTTCACY--
----TGACCTTTGACCCC
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGTGTCTCCTTTCACY--
----TGACCTTTGACCCC
 T C G A C A T G C G A T A T C G A G C T T G A C G A C T G T A C G A T C G A C T A G C T G A C T A T G C G C T A A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C