Information for 5-ATACSAARCAATT (Motif 8)

C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T
Reverse Opposite:
T G C A C G T A G C A T A C G T A C T G A G C T A G C T A C G T A T G C A C T G C G A T G T C A A C G T
p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.5 +/- 26.0bp
Average Position of motif in Background65.4 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:ATACSAARCAATT
-----NAACAAT-
 C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATACSAARCAATT-----
-TNCNNAACAATTTTTNC
 C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ATACSAARCAATT-----
---ATAAACAATTAAACA
 C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATACSAARCAATT--
-NNCNNAACAATTNT
 C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATACSAARCAATT-----
--AAAAACCAATTAAGAA
 C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATACSAARCAATT-----
-TNNAGAACAATANATNN
 C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATACSAARCAATT--------
AATAAAGAACAATAGAATTTCA
 A C G T C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATACSAARCAATT---
NNTNANAACAATTNNA
 C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:ATACSAARCAATT
------AACAAT-
 C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATACSAARCAATT----
TCACGGAACAATAGGTG
 C G T A A C G T C G T A T G A C T A C G T C G A C T G A C T G A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G