Information for 20-TTGTATTCTGGAG (Motif 28)

A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C C G T A A C T G C G T A C T G A A C G T C G T A A G T C C T G A C G T A
p-value:1e-4
log p-value:-9.716e+00
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 30.9bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTGTATTCTGGAG--
---GRTGMTRGAGCC
 A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTGTATTCTGGAG-
----GGTCTGGCAT
 A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TTGTATTCTGGAG
CCATTGTATGCAAAT-
 A C G T A C G T A C G T A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTGTATTCTGGAG---
CTAAGGTTCTAGATCAC
 A C G T A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTGTATTCTGGAG
ATTGTTTAN-----
 A C G T A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTGTATTCTGGAG--
BCNGGTTCTAGANCN
 A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TTGTATTCTGGAG
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TTGTATTCTGGAG
CCATTGTTNY------
 A C G T A C G T A C G T A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTATTCTGGAG
TNNTTTCGTATTNNANN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TTGTATTCTGGAG
-TGAATTATGCAT
 A C G T A G C T C T A G A C G T G T C A A G C T A C G T A G T C A C G T A C T G A C T G C G T A A C T G
A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T