Information for 12-GGAKTATTAT (Motif 24)

C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T
Reverse Opposite:
G C T A A C G T T G C A G T C A C G A T T G C A G T A C A C G T G T A C A G T C
p-value:1e-5
log p-value:-1.195e+01
Information Content per bp:1.681
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif5.67%
Number of Background Sequences with motif1087.3
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets52.8 +/- 26.2bp
Average Position of motif in Background50.6 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGAKTATTAT
GGGATTANN--
 A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGAKTATTAT
GGGATTAA---
 A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGAKTATTAT
NNGGATTAGN--
 A C G T A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGAKTATTAT
NGGATTAA---
 A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGAKTATTAT
GNGGATTAGN--
 A C G T A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGAKTATTAT
VRGGATTARN--
 A C G T A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGAKTATTAT
CGGATTAN---
 A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGAKTATTAT
RGGATTAR---
 A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------GGAKTATTAT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------GGAKTATTAT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A A C T G A C G T C G T A C A G T A C G T G T C A C G A T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A