p-value: | 1e-6 |
log p-value: | -1.478e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.47% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 43.7 +/- 29.8bp |
Average Position of motif in Background | 30.2 +/- 10.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGGTCGCCTTAGC-- -NGTTGCCATGGCAA |
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LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGGTCGCCTTAGC NRRGGGTCTT------ |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGGTCGCCTTAGC--- --GTTGCCATGGCAAC |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGTCGCCTTAGC--- -KGTTGCCATGGCAAC |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGGTCGCCTTAGC--- CGGTTGCCATGGCAAC |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGGTCGCCTTAGC-- -GGTTGCCATGGCAA |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGGTCGCCTTAGC CGCGCCGGGTCACGTA--- |
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PB0180.1_Sp4_2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGGTCGCCTTAGC NNGGCCACGCCTTTN- |
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PROX1/MA0794.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGTCGCCTTAGC CAAGACGCCTTA-- |
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PB0009.1_E2F3_1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGGTCGCCTTAGC ANCGCGCGCCCTTNN |
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