Information for 6-GAGWGACCCTGACCAT (Motif 9)

A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
Reverse Opposite:
T C G A A C G T A T C G A T C G A C G T A T G C C G T A C T A G A C T G A T C G C G A T A T G C C G T A A G T C A G C T T A G C
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.748
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 25.8bp
Average Position of motif in Background65.3 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAGWGACCCTGACCAT
---TGACCTTGACCT-
 A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGWGACCCTGACCAT
NAGGTCACNNTGACC--
 A C G T A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAGWGACCCTGACCAT
---TGACCTTGACCT-
 A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGWGACCCTGACCAT
NNNNTGACCCGGCGCG-
 A C G T A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGWGACCCTGACCAT
--NTGACCTTGA----
 A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGWGACCCTGACCAT
-NATGACCTTGA----
 A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGWGACCCTGACCAT
--AAGACCCYYN----
 A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGWGACCCTGACCAT
--ATGACCTTGA----
 A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGWGACCCTGACCAT
---TGACCTTGAV---
 A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGWGACCCTGACCAT
TCAGNGAGCGTGAC---
 A C G T A C T G C T G A A C T G C G A T T A C G C G T A A T G C G T A C A G T C A C G T T A C G C G T A A T G C A T G C T C G A A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T