Information for 6-CCCTTTGMSC (Motif 33)

G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C
Reverse Opposite:
A C T G T A C G C A T G T A G C C G T A C G T A C G T A T C A G C T A G C T A G
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.709
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.75%
Number of Background Sequences with motif669.0
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets49.8 +/- 27.7bp
Average Position of motif in Background49.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CCCTTTGMSC----
AATCCCTTTGATCTATC
 A C G T A C G T A C G T G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CCCTTTGMSC
-CCTTTGTT-
 G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CCCTTTGMSC----
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTTGMSC-
TNCCTTTGATGT
 A C G T G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCCTTTGMSC
-CCWTTGTY-
 G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTGMSC---
TGACCTTTGCCCTAN
 A C G T A C G T G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCCTTTGMSC-
-CCTTTGTTTT
 G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGMSC-
-CCTTTGATGT
 G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTTGMSC----
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTGMSC--
TGACCTTTGCCCTA
 A C G T A C G T G A T C A G T C A G T C C G A T C G A T C G A T A T C G G T A C A T G C T G A C A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A