Information for 11-GMAATARCCAAGR (Motif 28)

A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G
Reverse Opposite:
A G C T A G T C A C G T A C G T A C T G A C T G A G C T A C G T C G T A A C G T A C G T A C T G A G T C
p-value:1e-8
log p-value:-2.056e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.6 +/- 24.2bp
Average Position of motif in Background58.8 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GMAATARCCAAGR-
AAAAATAACAAACGG
 A C G T A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GMAATARCCAAGR------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GMAATARCCAAGR
-AAAGATCAAAGG
 A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GMAATARCCAAGR
--AATAAACAATN
 A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GMAATARCCAAGR
AGATGCAATCCC-----
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GMAATARCCAAGR-
--ACTAGCCAATCA
 A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PH0061.1_Hoxb6/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GMAATARCCAAGR
NNNGTAATTACNNATA
 A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GMAATARCCAAGR
-----TGCCAA--
 A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GMAATARCCAAGR---
-AAAGATCAAAGGGTT
 A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GMAATARCCAAGR--
NNNGTAACTANGNNA
 A C T G G T A C C G T A C G T A C G A T G T C A C T G A A G T C A G T C C G T A C G T A A C T G T C A G A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A