Information for 4-GGGCGCTCCGCTG (Motif 7)

T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G
Reverse Opposite:
T A G C G C T A A C T G A G T C A T C G A T C G C G T A T A C G A T G C C A T G G T A C T A G C A G T C
p-value:1e-10
log p-value:-2.427e+01
Information Content per bp:1.773
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif77.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.9 +/- 25.3bp
Average Position of motif in Background52.0 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGGCGCTCCGCTG
----GCTCCG---
 T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGCGCTCCGCTG-
NNGCNCTGCGCGGC
 T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGGCGCTCCGCTG
TTGGGGGCGCCCCTAG-
 A C G T A C G T A C G T A C G T T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGGCGCTCCGCTG---
----GCTCCGCCCMCY
 T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL001.1_MTE/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGCTCCGCTG----
NCGACCGCTCCGCTCGAAA
 A C G T A C G T T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G A C G T A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGGCGCTCCGCTG
CGTGGGTGGTCC----
 A C G T A C G T A C G T T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GGGCGCTCCGCTG
--------NGCTN
 T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGGCGCTCCGCTG--
-GACCCCCCGCTGTG
 T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGGCGCTCCGCTG---
-GACCCCCCGCTGCGC
 T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GGGCGCTCCGCTG---
-GACCCCCCGCTGTGC
 T A C G A C T G C A T G G A T C A T C G A G T C C G A T T A G C A T G C A C T G A G T C C G A T A T C G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C