Information for 6-TCACCTAAKTAGG (Motif 12)

C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G
Reverse Opposite:
A T G C G T A C C G A T C G T A G T A C A C G T A C G T C T G A C T A G C T A G A C G T A C T G G T C A
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.761
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.5 +/- 17.4bp
Average Position of motif in Background61.0 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0089.1_Isx/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TCACCTAAKTAGG---
ACNNCTAATTAGNNNN
 C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G A C G T A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

PH0097.1_Lhx6_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TCACCTAAKTAGG----
TCCACTAATTAGCGGTT
 C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G A C G T A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

PAX4/MA0068.2/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TCACCTAAKTAGG
----CTAATTAG-
 C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G
A C G T A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCACCTAAKTAGG----
ACCCCTAATTAGCGGTG
 C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G A C G T A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0092.1_Lhx2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCACCTAAKTAGG----
TAAACTAATTAGTGAAC
 C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G A C G T A C G T A C G T A C G T
C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

LBX1/MA0618.1/Jaspar

Match Rank:6
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TCACCTAAKTAGG
----TTAATTAG-
 C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G
A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCACCTAAKTAGG----
TAAACTAATTAGCTTTG
 C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G A C G T A C G T A C G T A C G T
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G

PH0160.1_Shox2/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTAAKTAGG---
NNNAATTAATTAANNNG
 A C G T C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G A C G T A C G T A C G T
T A G C G T C A A G T C T C G A G T C A A G C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A T G C C A T G G T A C A T C G

NOTO/MA0710.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TCACCTAAKTAGG
---NNTAATTAGN
 C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G
A C G T A C G T A C G T T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

PH0131.1_Pax4/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCACCTAAKTAGG----
TGAACTAATTAGCCCAC
 C A G T G T A C G T C A A G T C A G T C A G C T C G T A C G T A A C T G C G A T C G T A A C T G A T C G A C G T A C G T A C G T A C G T
G C A T T A C G T C G A C G T A A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G A T C A G T C T A G C C T G A G T A C