Information for 3-GTGCGCAGGGAGT (Motif 4)

A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T
Reverse Opposite:
C G T A A G T C A C G T A G T C A G T C A G T C A C G T A C T G A T G C A C T G A G T C C G T A A G T C
p-value:1e-13
log p-value:-3.101e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 13.0bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGCGCAGGGAGT
-TGCCCAGNHW--
 A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGCGCAGGGAGT
NGTCCCNNGGGA--
 A C G T A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGCGCAGGGAGT
GTCCCCAGGGGA-
 A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTGCGCAGGGAGT
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGCGCAGGGAGT
ATGCCCACC----
 A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTGCGCAGGGAGT
ANTCCCTNGGGAAT
 A C G T A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GTGCGCAGGGAGT
NTNTATGTGCACATNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTGCGCAGGGAGT
GGGCCGTGTGCAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTGCGCAGGGAGT-
----ACAGGAAGTG
 A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTGCGCAGGGAGT-
----ACAGGAAGTG
 A C T G A C G T A C T G A G T C A T C G A G T C C G T A A C T G C T A G A C T G C G T A A C T G G C A T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G