Information for 4-CTGCAWGACACCCAAA (Motif 11)

T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A
Reverse Opposite:
A C G T A G C T A C G T C T A G A C T G A C T G C G A T A C T G C G A T A G T C C G T A C A G T A T C G G A T C C T G A A C T G
p-value:1e-8
log p-value:-2.033e+01
Information Content per bp:1.699
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 30.5bp
Average Position of motif in Background50.4 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGCAWGACACCCAAA-
ATAAATGACACCTATCA
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Klf1/MA0493.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGCAWGACACCCAAA
---GGCCACACCCA--
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A
A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTGCAWGACACCCAAA
----GCCACACCCA--
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A
A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGCAWGACACCCAAA
---GGCCACACCCAN-
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A
A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGCAWGACACCCAAA
--GSCTGTCACTCA--
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGCAWGACACCCAAA---
--AGGAGACCCCCAATTTG
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGCAWGACACCCAAA
-TGGCAGNCTGCCAG-
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTGCAWGACACCCAAA
-----TBGCACGCAA-
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTGCAWGACACCCAAA
-----TGACACCT---
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGCAWGACACCCAAA----
CCCCAAACCACCCCCCCCCA
 T G A C A G C T C A T G A T G C G T C A C G A T T A C G C G T A G T A C C G T A G T A C A G T C A G T C G T C A C T G A T C G A A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C