Information for 1-AAAAATGCAA (Motif 5)

T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A
Reverse Opposite:
A C G T G C A T C T A G A T G C G C T A G A C T G A C T A G C T A G C T A C G T
p-value:1e-11
log p-value:-2.601e+01
Information Content per bp:1.689
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif7.13%
Number of Background Sequences with motif1202.8
Percentage of Background Sequences with motif2.53%
Average Position of motif in Targets55.1 +/- 25.3bp
Average Position of motif in Background50.8 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---AAAAATGCAA--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAAAATGCAA--
GAAAMTGAAACT
 T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAAATGCAA--
GAAAGTGAAAGT
 T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAAAATGCAA--
--ATATGCAAAT
 T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AAAAATGCAA-----
--ATATGCAAATNNN
 T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAAATGCAA--
GAAASYGAAASY
 T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAATGCAA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAAAATGCAA----
--AGATGCAATCCC
 T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAAATGCAA---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAAAATGCAA--
GAAACTGAAACT
 T G C A T C G A C T G A C T G A C T G A C G A T A T C G G A T C C G T A T G C A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T