Information for 4-CATGATCGGC (Motif 11)

G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C
Reverse Opposite:
A C T G A G T C A T G C A C T G T C G A A G C T A T G C G T C A A C G T A C T G
p-value:1e-9
log p-value:-2.278e+01
Information Content per bp:1.854
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.0 +/- 24.8bp
Average Position of motif in Background56.7 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATGATCGGC
CATGAC----
 G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CATGATCGGC----
--TGATTGGCTANN
 G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATGATCGGC------
-CTGATTGGTCNATTT
 G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATGATCGGC---
-BTGABTGACAGS
 G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATGATCGGC
-TTGATTGN-
 G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CATGATCGGC-
-CCGATTGGCT
 G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CATGATCGGC
NCGTGACN---
 A C G T G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CATGATCGGC
-ATAATCCC-
 G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CATGATCGGC
NCACGTGACN---
 A C G T A C G T A C G T G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CATGATCGGC---
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T G T A C C G T A A C G T A T C G C T G A A C G T A G T C T A C G A C T G A G T C A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C