Information for 13-GCACCTCCGC (Motif 38)

C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C
Reverse Opposite:
T C A G T G A C A T C G A T C G C G T A T C A G A T C G A G C T T C A G G T A C
p-value:1e-6
log p-value:-1.495e+01
Information Content per bp:1.672
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif12.59%
Number of Background Sequences with motif3177.4
Percentage of Background Sequences with motif6.77%
Average Position of motif in Targets49.1 +/- 27.1bp
Average Position of motif in Background49.4 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETV6/MA0645.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCACCTCCGC-
-CACTTCCGCT
 C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C A C G T
A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCACCTCCGC
SNGCACCTGCHS
 A C G T A C G T C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Gabpa/MA0062.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCACCTCCGC
NCCACTTCCGG
 A C G T C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCACCTCCGC
TGACACCT----
 A C G T A C G T C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCACCTCCGC--
CAACGTCCGCGG
 C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C A C G T A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GCACCTCCGC
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCACCTCCGC-
GCGCCTGCGCA
 C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCACCTCCGC
CGCACCTGCT-
 A C G T C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCACCTCCGC-
-NACTTCCGGT
 C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C A C G T
A C G T G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCACCTCCGC
NNCACCTGNN-
 A C G T C A T G A G T C T C G A A T G C A G T C G C A T T A G C T A G C A C T G A G T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T