Information for 18-GCGCGGTCGAAGGGCT (Motif 34)

A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T
Reverse Opposite:
G T C A A T C G A G T C A G T C A G T C A C G T A C G T A G T C A C T G C G T A A G T C A G T C A T C G A T G C A C T G G T A C
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 33.1bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT
-AGGGGTCAGAGGTCA
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT
--GGGGTCAAAGGTCA
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT
--GGGGTCAAAGGTCA
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T
A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT
--GGGGTCAAAGGTCA
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT
--GAGGTCAAAGGTCA
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T
A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT-
---CCGCCCAAGGGCAG
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT
--GAGGTCAAAGGTCA
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

RXRA::VDR/MA0074.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT--
---GGGTCAACGAGTTCA
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT--
-AAAGGTCAAAGGTCAAC
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T A C G T A C G T
A C G T G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCGCGGTCGAAGGGCT
--GGGGCCCAAGGGGG
 A C T G A G T C A T C G A T G C A C T G A C T G A C G T A G T C A C T G C G T A G T C A A C T G C T A G A C T G A T G C A C G T
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G