Information for 17-GAAAAAAGAGGGCWGC (Motif 31)

T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
Reverse Opposite:
C T A G A T G C G C T A A C T G A G T C A G T C A G T C A G C T G T A C A G C T A G C T A C G T A G C T A C G T A C G T A G T C
p-value:1e-8
log p-value:-1.883e+01
Information Content per bp:1.662
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif44.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets40.2 +/- 23.5bp
Average Position of motif in Background49.9 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GAAAAAAGAGGGCWGC
----CAAGATGGCGGC
 T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GAAAAAAGAGGGCWGC
TACTGGAAAAAAAA-------
 A C G T A C G T A C G T A C G T A C G T T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAAAAAAGAGGGCWGC
----CAAGATGGCGGC
 T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAAAGAGGGCWGC
GGAACAAAGR-------
 A C G T T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GAAAAAAGAGGGCWGC
AGAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAAAAAAGAGGGCWGC
GGGRAARRGRMCAGMTG-
 A C G T A C G T T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAAAGAGGGCWGC--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GAAAAAAGAGGGCWGC
ATAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GAAAAAAGAGGGCWGC
GTTAAAAAAAAAAATTA---
 A C G T A C G T A C G T A C G T T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAAAGAGGGCWGC
AAAACAAAGG-------
 A C G T T C A G T C G A T C G A T C G A T G C A T C G A C T G A A C T G T C G A A C T G C T A G T C A G A G T C C G A T A T C G G A T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T