Information for 2-GTGTCAAGGGAAAGGC (Motif 3)

A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A G C T C G A T G T A C A G T C A G T C A G C T A C G T A C T G C G T A A G T C C G T A A G T C
p-value:1e-19
log p-value:-4.581e+01
Information Content per bp:1.925
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.1 +/- 23.2bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTGTCAAGGGAAAGGC
---GAAAGTGAAAGT-
 A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCAAGGGAAAGGC
CCTGTCAA---------
 A C G T A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGTCAAGGGAAAGGC
NTGTCAN---------
 A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTGTCAAGGGAAAGGC-
--AGAAAGTGAAAGTGA
 A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C A C G T
A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGTCAAGGGAAAGGC
AGGTCAAGGTCA----
 A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTGTCAAGGGAAAGGC
AAGGTGTGAAA--------
 A C G T A C G T A C G T A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTGTCAAGGGAAAGGC
AGGTGTGAAM--------
 A C G T A C G T A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTGTCAAGGGAAAGGC
TAGGTGTGAAG--------
 A C G T A C G T A C G T A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGTCAAGGGAAAGGC
AGGTCAAGGTCA----
 A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTGTCAAGGGAAAGGC
--BTCAAGGTCA----
 A C T G A C G T C T A G C G A T G T A C C G T A C T G A A C T G A C T G A C T G C G T A C T G A C G T A C T A G A C T G A G T C
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T