Information for 14-GTTCACAATCACACAA (Motif 28)

A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A
Reverse Opposite:
C G A T A C G T A C T G A C G T A T C G A C G T A C T G C T G A A G C T A C G T A C T G A C G T C T A G C G T A C G T A A T G C
p-value:1e-9
log p-value:-2.077e+01
Information Content per bp:1.808
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 21.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTTCACAATCACACAA
----CCAATCAA----
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTCACAATCACACAA-
GACCACATTCATACAAT
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTTCACAATCACACAA-
-----CNGTCACGCCAC
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GTTCACAATCACACAA-
-------ATCACCCCAT
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GTTCACAATCACACAA-
-------ATCACCCCAT
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTTCACAATCACACAA----
----CGAAGCACACAAAATA
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GTTCACAATCACACAA-
-------ATCACCCCAC
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTTCACAATCACACAA
SCTGTCAVTCAV----
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTTCACAATCACACAA
----CAAATCACTG--
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GTTCACAATCACACAA
--------TCACACCT
 A T C G A C G T A C G T A G T C G T C A A G T C C G T A C T G A A G C T A G T C C G T A A T G C G T C A A G T C T G C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T