Information for 1-CGCGGGGCAAGTGACC (Motif 2)

A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
Reverse Opposite:
C T A G A C T G A G C T A G T C G C T A A G T C A C G T A C G T C T A G A G T C A G T C G T A C G T A C A C T G T G A C A C T G
p-value:1e-25
log p-value:-5.833e+01
Information Content per bp:1.877
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.9 +/- 25.4bp
Average Position of motif in Background50.1 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CGCGGGGCAAGTGACC
-----GCCACGTGACC
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CGCGGGGCAAGTGACC
-----GTCATGTGACC
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCGGGGCAAGTGACC
---AAGGCAAGTGT--
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGCGGGGCAAGTGACC-
---NAGGTCANTGACCT
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C A C G T
A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGCGGGGCAAGTGACC
-----GGCACGTGNC-
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGCGGGGCAAGTGACC
--CCGGTCACGTGA--
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
A C G T A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGCGGGGCAAGTGACC
-----RTCATGTGAC-
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGCGGGGCAAGTGACC
-----GTCACGTGAC-
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGCGGGGCAAGTGACC
----TGGCACGTGCCG
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGCGGGGCAAGTGACC
------NCACGTGACN
 A G T C A C T G A G T C A C T G A C T G C T A G A C T G A G T C C G T A C G T A A C T G C A G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C