Information for 3-GCGTGTAAAG (Motif 8)

A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C T G A G T C
p-value:1e-14
log p-value:-3.423e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.6 +/- 21.4bp
Average Position of motif in Background73.1 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGTGTAAAG
TGCGTG-----
 A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGTAAAG
TTGCGTGCVA--
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGTGTAAAG
TAGGTGTGAAG
 A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGTAAAG
TGGCGGGAAAHB
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGTGTAAAG
AAGGTGTGAAA
 A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCGTGTAAAG
TTCGCGCGAAAA-
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGTAAAG
NNCGCGTGNN---
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCGTGTAAAG-
GCTCGTAAAAA
 A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C G T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCGTGTAAAG-
---DGTAAACA
 A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGTGTAAAG
AAGGTGTKAA-
 A C G T A C T G A G T C A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T