Information for 5-TGGGTGTCACGGGTAG (Motif 5)

A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
Reverse Opposite:
A G T C A G C T C G T A A T G C A G T C A G T C A T C G A C G T C T A G C G T A A G T C C T G A A G T C G T A C A G T C C G T A
p-value:1e-17
log p-value:-3.999e+01
Information Content per bp:1.923
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 26.4bp
Average Position of motif in Background59.1 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGTCACGGGTAG
TNNNNGGTGTCATNTNT--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGGGTGTCACGGGTAG
----AGTCACGC----
 A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGGGTGTCACGGGTAG
----TGTCAGGGGGCG
 A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGGGTGTCACGGGTAG
AATGGGGTATCACGTTT--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGGGTGTCACGGGTAG
----GGTCACGTGC--
 A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
A C G T A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGGTGTCACGGGTAG
-AGGTGTCA-------
 A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGGGTGTCACGGGTAG
----GGTCACGTGG--
 A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
A C G T A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGGTGTCACGGGTAG
-VGCTGWCAVB-----
 A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGGTGTCACGGGTAG
GATGGGGTATCATTTTT--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGGGTGTCACGGGTAG
GATAGGGTATCACTAAT--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G C T C T A G A C G T A G T C C G T A T A G C A C T G A C T G A T C G A C G T C T G A A C T G
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T A C G T A C G T