Information for 23-GCTCCTAACTGAG (Motif 43)

A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C
p-value:1e-5
log p-value:-1.281e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.7 +/- 5.2bp
Average Position of motif in Background51.0 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTCCTAACTGAG
GCTCCG-------
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCTCCTAACTGAG
----CTAATKGV-
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCTCCTAACTGAG--
TATCATAATTAAGGA
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTCCTAACTGAG-
--TGCTGASTCAGC
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCTCCTAACTGAG-
----NHAACBGYYV
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCTCCTAACTGAG-
----CCAACTGCCA
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCTCCTAACTGAG
---GCTAATTGCT
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCTCCTAACTGAG---
-CGACCAACTGCCGTG
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCTCCTAACTGAG
---GTTAACTAGN
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCTCCTAACTGAG----
-CGACCAACTGCCATGC
 A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C