Information for 19-GAGCCGGAGC (Motif 42)

C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C C G A T A T G C G A T C A C T G A C T G A T G C C G A T G T A C
p-value:1e-5
log p-value:-1.322e+01
Information Content per bp:1.837
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.79%
Number of Background Sequences with motif563.9
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets62.2 +/- 18.5bp
Average Position of motif in Background50.3 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GAGCCGGAGC
GAGSCCGAGC
 C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:GAGCCGGAGC
----CGGAGC
 C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGCCGGAGC
GGGCGGGACC
 C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GAGCCGGAGC--
SDGCAGGTGCNS
 C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGCCGGAGC-
GRTGMTRGAGCC
 A C G T C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGCCGGAGC
RGKGGGCGGAGC
 A C G T A C G T C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGCCGGAGC-
-ANCAGGATGT
 C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C A C G T
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCCGGAGC-
GCGCCTGCGCA
 C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCGGAGC-
GGGGGCGGGGCC
 A C G T C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GAGCCGGAGC-
------CAGCC
 C A T G G C T A A T C G A G T C G T A C C A T G A T C G C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C