Information for 12-AAGATRCTTC (Motif 30)

C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C
Reverse Opposite:
A C T G C G T A C T G A C T A G A G C T T C G A A C G T A T G C G C A T A C G T
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.691
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif581.0
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets48.3 +/- 31.3bp
Average Position of motif in Background49.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:AAGATRCTTC-
-----GCTTCC
 C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGATRCTTC-----
TAAGCCACTTGAAATT
 A C G T C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

ETV6/MA0645.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAGATRCTTC----
----CACTTCCGCT
 C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGATRCTTC-----
TAAGCCACTTGAAATT
 A C G T C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C A C G T A C G T A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGATRCTTC-----
TAAGCCACTTAACATT
 A C G T C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C A C G T A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AAGATRCTTC--
---CCACTTGAA
 C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C A C G T A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGATRCTTC
--CAAGCTT-
 C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGATRCTTC-
--ACCACTTAA
 C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C A C G T
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.57
Offset:-10
Orientation:forward strand
Alignment:----------AAGATRCTTC
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAGATRCTTC-----
----NACTTCCGGGT
 C G T A C G T A A T C G G T C A A G C T T C G A A G T C A G C T A C G T T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G A T C A G T G T A C G T A C A C T G A T C G A C T G G C A T