Information for 12-VCCACGCTGACCTCAC (Motif 28)

T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T T C A G C G T A A C T G A C T G A C G T A T G C G T C A A C T G A T G C A T C G A C G T A T C G A C T G A C G T
p-value:1e-8
log p-value:-2.063e+01
Information Content per bp:1.813
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 27.9bp
Average Position of motif in Background38.3 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:VCCACGCTGACCTCAC
-------TGACCTYA-
 T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:VCCACGCTGACCTCAC
----CGGTGACGTCAC
 T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:VCCACGCTGACCTCAC
-------TGACCT---
 T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--VCCACGCTGACCTCAC
AGGNCANNGTGACCT---
 A C G T A C G T T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:VCCACGCTGACCTCAC
-------TGACCYCT-
 T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:VCCACGCTGACCTCAC
---NNACTTACCTN--
 T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:VCCACGCTGACCTCAC
----NGRTGACGTCAY
 T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:VCCACGCTGACCTCAC
------GTGACCTT--
 T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:VCCACGCTGACCTCAC
----NRRTGACGTCAT
 T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

CREB1/MA0018.2/Jaspar

Match Rank:10
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:VCCACGCTGACCTCAC
-------TGACGTCA-
 T C G A A G T C A T G C G T C A A T G C A T C G A G T C A C G T A T C G C G T A A G T C A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T