Information for 10-MGAMAYCMKGWGTCCT (Motif 24)

G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T
Reverse Opposite:
C G T A A C T G C A T G C T G A A G T C C G T A A G T C G T A C A C T G A C T G C T G A A C G T A C G T A C G T A T G C A C G T
p-value:1e-10
log p-value:-2.315e+01
Information Content per bp:1.835
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.6 +/- 12.0bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:MGAMAYCMKGWGTCCT-
---------GTGACCTT
 G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:forward strand
Alignment:MGAMAYCMKGWGTCCT
GAAGAACAGGTGTCCG
 G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:forward strand
Alignment:MGAMAYCMKGWGTCCT
----GTCATGTGACC-
 G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:MGAMAYCMKGWGTCCT--
----------TGACCTYA
 G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:MGAMAYCMKGWGTCCT
----RTCATGTGAC--
 G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:MGAMAYCMKGWGTCCT-
TGACCTTTCGTGACCTT
 G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

USF1/MA0093.2/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:MGAMAYCMKGWGTCCT
----GCCACGTGACC-
 G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T
A C G T A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

NFE2/MA0841.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:MGAMAYCMKGWGTCCT-
------GATGAGTCATN
 G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:MGAMAYCMKGWGTCCT
-------ATGAGTCAT
 G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----MGAMAYCMKGWGTCCT
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T G T C A A T C G C G T A G T C A C G T A G A C T G T A C G T A C C A G T A C T G C G A T A C T G A G C T G A T C A G T C A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T